[DH-337] upgrade R, R studio to latest version on hubs #5945
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This looks thorough. We won't be able to anticipate libraries that are incompatible with this change. We should test various R graphics outputs in staging.
Could you please also bump shiny-server from 1.5.21 to 1.5.22 in the shiny Dockerfile? Mostly this is to avoid another CI run, but ideally would should bump shiny-server at the same time as RStudio and R.
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Actually, since the shiny test already passed, we should delay shiny-server bump to a different PR to prevent another CI run for all affected images. |
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Thanks, wish I had communicated the R upgrade as part of the onboarding email. We should probably test multiple course notebooks to verify whether RStudio/Shiny works fine in Datahub, R, Public Health and ISchool Hubs. Sharing some course repos for testing,
Datahub/R hub:
https://github.com/ds-modules/PS3-SU23/tree/main
https://github.com/ds-modules/ECON-140-FA22-RDE/tree/main
Ischool Hub:
https://github.com/UCB-MIDS/w241
PH Hub:
https://github.com/ph142-ucb/ph142-su24
Shiny Hub:
https://github.com/ds-modules/polisci-3
tbf, it's not a big deal and i'll cancel the current build(s) and make the change(s). |
shaneknapp
changed the title
https://jira-secure.berkeley.edu/browse/DH-337
fwiw, biology is gonna be a chore... that image basically needs to be completely redone from scratch.bio was actually much easier than anticipated, but boy-howdy that
Dockerfileis a mess.